TL;DR
Ensembl is a Model Context Protocol (MCP) server. Look up genes, fetch sequences, predict variant consequences, find orthologs and xrefs via Ensembl. Install with: bun @cyanheads/ensembl-mcp-server. Source: https://github.com/cyanheads/ensembl-mcp-server. It speaks the Model Context Protocol and works with any compatible client (Claude, Cursor, Cline, Windsurf, Warp and more).
Ensembl
Look up genes, fetch sequences, predict variant consequences, find orthologs and xrefs via Ensembl.
Install Command
bun @cyanheads/ensembl-mcp-serverFrequently Asked Questions
Ensembl is a Model Context Protocol server that Look up genes, fetch sequences, predict variant consequences, find orthologs and xrefs via Ensembl.
You can install it by running the install command: `bun @cyanheads/ensembl-mcp-server`. It then becomes available to any MCP-compatible client such as Claude, Cursor, Cline, Windsurf.
The Ensembl MCP Server is compatible with any client that speaks the Model Context Protocol — including Claude, Cursor, Cline, Windsurf.
Check the project license on its repository before use.
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- License
- Last Updated
- Aug 12, 2026
- Languages
- TypeScript
Client Compatibility
Speaks the Model Context Protocol — works with any compatible client.