TL;DR
ENCODE Toolkit is a Model Context Protocol (MCP) server. 20 MCP tools + 48 skills for ENCODE Project genomics — search, download, pipelines Install with: npx -y encode-toolkit. Source: https://github.com/ammawla/encode-toolkit. Compatible with MCP clients such as Claude Desktop, Cursor, Cline and Windsurf.
ENCODE Toolkit
20 MCP tools + 48 skills for ENCODE Project genomics — search, download, pipelines
Install Command
npx -y encode-toolkitFrequently Asked Questions
ENCODE Toolkit is a Model Context Protocol server that 20 MCP tools + 48 skills for ENCODE Project genomics — search, download, pipelines
You can install it by running the install command: `npx -y encode-toolkit`. It then becomes available to any MCP-compatible client such as Claude, Cursor, Cline, Windsurf.
The ENCODE Toolkit MCP Server is compatible with any client that speaks the Model Context Protocol — including Claude, Cursor, Cline, Windsurf.
Check the project license on its repository before use.
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- Agent Rank
- 0.0
- License
- Last Updated
- Aug 12, 2026
- Languages
- TypeScript
Client Compatibility
Speaks the Model Context Protocol — works with any compatible client.